{"id":"https://openalex.org/W1523440374","doi":"https://doi.org/10.3233/isb-2010-0414","title":"Modelling the Molecular Interactions in the Flower Developmental Network of Arabidopsis thaliana","display_name":"Modelling the Molecular Interactions in the Flower Developmental Network of Arabidopsis thaliana","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W1523440374","doi":"https://doi.org/10.3233/isb-2010-0414","mag":"1523440374","pmid":"https://pubmed.ncbi.nlm.nih.gov/22430225"},"language":"en","primary_location":{"id":"doi:10.3233/isb-2010-0414","is_oa":false,"landing_page_url":"https://doi.org/10.3233/isb-2010-0414","pdf_url":null,"source":{"id":"https://openalex.org/S120694666","display_name":"In Silico Biology","issn_l":"1386-6338","issn":["1386-6338","1434-3207"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"In Silico Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042581802","display_name":"Kerstin Kaufmann","orcid":"https://orcid.org/0000-0001-7960-6256"},"institutions":[{"id":"https://openalex.org/I4210118008","display_name":"Centre for BioSystems Genomics","ror":"https://ror.org/02j7y6936","country_code":"NL","type":"nonprofit","lineage":["https://openalex.org/I4210118008"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Kerstin Kaufmann","raw_affiliation_strings":["Business Unit Bioscience, Plant Research International, Wageningen, The Netherlands","Business unit Bioscience, Plant Research International, Wageningen, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Business Unit Bioscience, Plant Research International, Wageningen, The Netherlands","institution_ids":["https://openalex.org/I4210118008"]},{"raw_affiliation_string":"Business unit Bioscience, Plant Research International, Wageningen, The Netherlands","institution_ids":["https://openalex.org/I4210118008"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025220924","display_name":"Masao Nagasaki","orcid":"https://orcid.org/0000-0002-4292-8785"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masao Nagasaki","raw_affiliation_strings":["Human Genome Center, Institute of Medical Science, University of Tokyo, Tokyo, Japan","Human genome center, Institute of medical science, University of Tokyo, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Human Genome Center, Institute of Medical Science, University of Tokyo, Tokyo, Japan","institution_ids":[]},{"raw_affiliation_string":"Human genome center, Institute of medical science, University of Tokyo, Tokyo, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015518153","display_name":"Ruy J\u00e1uregui","orcid":"https://orcid.org/0000-0002-3484-8937"},"institutions":[{"id":"https://openalex.org/I4210120325","display_name":"Biobase (Germany)","ror":"https://ror.org/0325nt175","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210120325"]},{"id":"https://openalex.org/I913481162","display_name":"Wageningen University & Research","ror":"https://ror.org/04qw24q55","country_code":"NL","type":"education","lineage":["https://openalex.org/I913481162"]}],"countries":["DE","NL"],"is_corresponding":false,"raw_author_name":"Ruy J\u00e1uregui","raw_affiliation_strings":["BIOBASE GmbH, Wolfenb\u00fcttel, Germany","Wageningen University and Research"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BIOBASE GmbH, Wolfenb\u00fcttel, Germany","institution_ids":["https://openalex.org/I4210120325"]},{"raw_affiliation_string":"Wageningen University and Research","institution_ids":["https://openalex.org/I913481162"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":2.4387,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.88712093,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"10","issue":"1,2","first_page":"125","last_page":"143"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11927","display_name":"Plant Reproductive Biology","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11247","display_name":"Plant nutrient uptake and metabolism","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/homeotic-gene","display_name":"Homeotic gene","score":0.9153423309326172},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.746197521686554},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.6675200462341309},{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.6309685111045837},{"id":"https://openalex.org/keywords/arabidopsis-thaliana","display_name":"Arabidopsis thaliana","score":0.6290968060493469},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.5933329463005066},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5740550756454468},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.5261428356170654},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.47254467010498047},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.46262598037719727},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.45702287554740906},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3939773440361023},{"id":"https://openalex.org/keywords/mutant","display_name":"Mutant","score":0.28150320053100586}],"concepts":[{"id":"https://openalex.org/C46751350","wikidata":"https://www.wikidata.org/wiki/Q1939530","display_name":"Homeotic gene","level":4,"score":0.9153423309326172},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.746197521686554},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.6675200462341309},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.6309685111045837},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.6290968060493469},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.5933329463005066},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5740550756454468},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.5261428356170654},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.47254467010498047},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.46262598037719727},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.45702287554740906},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3939773440361023},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.28150320053100586}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013269","descriptor_name":"Stochastic Processes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018506","descriptor_name":"Gene Expression Regulation, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025461","descriptor_name":"Feedback, Physiological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025461","descriptor_name":"Feedback, Physiological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025461","descriptor_name":"Feedback, Physiological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029681","descriptor_name":"Arabidopsis Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035264","descriptor_name":"Flowers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035264","descriptor_name":"Flowers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035264","descriptor_name":"Flowers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035264","descriptor_name":"Flowers","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D035264","descriptor_name":"Flowers","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D035264","descriptor_name":"Flowers","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.3233/isb-2010-0414","is_oa":false,"landing_page_url":"https://doi.org/10.3233/isb-2010-0414","pdf_url":null,"source":{"id":"https://openalex.org/S120694666","display_name":"In Silico Biology","issn_l":"1386-6338","issn":["1386-6338","1434-3207"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310318577","host_organization_name":"IOS Press","host_organization_lineage":["https://openalex.org/P4310318577"],"host_organization_lineage_names":["IOS Press"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"In Silico Biology","raw_type":"journal-article"},{"id":"pmid:22430225","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22430225","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"In silico biology","raw_type":null},{"id":"pmh:wur:oai:library.wur.nl:wurpubs/392569","is_oa":false,"landing_page_url":"https://research.wur.nl/en/publications/modelling-the-molecular-interactions-in-the-flower-developmental-","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"In Silico Biology, 10, 125 - 143","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Life in Land","score":0.550000011920929,"id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":71,"referenced_works":["https://openalex.org/W188614979","https://openalex.org/W191497389","https://openalex.org/W1017325968","https://openalex.org/W1489737525","https://openalex.org/W1544042732","https://openalex.org/W1918865178","https://openalex.org/W1963553964","https://openalex.org/W1969231273","https://openalex.org/W1970150468","https://openalex.org/W1975954590","https://openalex.org/W1982744028","https://openalex.org/W1985241409","https://openalex.org/W1990139847","https://openalex.org/W1996765935","https://openalex.org/W2013061140","https://openalex.org/W2015246122","https://openalex.org/W2018186094","https://openalex.org/W2018705472","https://openalex.org/W2019136439","https://openalex.org/W2028191583","https://openalex.org/W2032805330","https://openalex.org/W2034015100","https://openalex.org/W2041122198","https://openalex.org/W2044801809","https://openalex.org/W2046944468","https://openalex.org/W2055952401","https://openalex.org/W2056228546","https://openalex.org/W2057606871","https://openalex.org/W2058151615","https://openalex.org/W2062560058","https://openalex.org/W2065692248","https://openalex.org/W2067387615","https://openalex.org/W2068660989","https://openalex.org/W2081146141","https://openalex.org/W2089099679","https://openalex.org/W2097648520","https://openalex.org/W2099545251","https://openalex.org/W2106214237","https://openalex.org/W2106499295","https://openalex.org/W2107003437","https://openalex.org/W2111953261","https://openalex.org/W2117802964","https://openalex.org/W2118651614","https://openalex.org/W2126089568","https://openalex.org/W2127068094","https://openalex.org/W2137791798","https://openalex.org/W2138844020","https://openalex.org/W2139177135","https://openalex.org/W2140074300","https://openalex.org/W2141368462","https://openalex.org/W2142204601","https://openalex.org/W2142884215","https://openalex.org/W2143310096","https://openalex.org/W2143883853","https://openalex.org/W2146240539","https://openalex.org/W2147835081","https://openalex.org/W2150153992","https://openalex.org/W2150892841","https://openalex.org/W2151839035","https://openalex.org/W2154892216","https://openalex.org/W2155186053","https://openalex.org/W2162505680","https://openalex.org/W2163710042","https://openalex.org/W2164514934","https://openalex.org/W2167681032","https://openalex.org/W2167932128","https://openalex.org/W2169804422","https://openalex.org/W2171594815","https://openalex.org/W2171713538","https://openalex.org/W2272447140","https://openalex.org/W2412839122"],"related_works":["https://openalex.org/W1594012662","https://openalex.org/W2152698116","https://openalex.org/W2106134872","https://openalex.org/W2077106292","https://openalex.org/W2269421989","https://openalex.org/W3147624048","https://openalex.org/W2006745274","https://openalex.org/W2355042192","https://openalex.org/W2391996571","https://openalex.org/W2372627703"],"abstract_inverted_index":{"We":[0,47,179],"present":[1],"a":[2],"dynamical":[3],"model":[4],"of":[5,22,44,61,82,90,97,128,159,172,195],"the":[6,20,23,37,51,80,88,95,112,193],"gene":[7,143,148],"network":[8,16,71,105],"controlling":[9],"flower":[10],"development":[11],"in":[12,67,122,142,163,177],"Arabidopsis":[13],"thaliana.":[14],"The":[15,70,103,126],"is":[17,73,153],"centered":[18],"at":[19],"regulation":[21],"floral":[24,45,101],"organ":[25,56,123],"identity":[26],"genes":[27,191],"(AP1,":[28],"AP2,":[29],"AP3,":[30],"PI":[31],"and":[32,34,49,93,115],"AG)":[33],"ends":[35],"with":[36],"transcription":[38],"factor":[39],"complexes":[40],"responsible":[41],"for":[42,111,134],"differentiation":[43],"organs.":[46],"built":[48],"simulated":[50,116],"regulatory":[52,182],"interactions":[53],"that":[54],"determine":[55],"specificity":[57],"using":[58],"an":[59],"extension":[60],"hybrid":[62],"Petri":[63],"nets":[64],"as":[65],"implemented":[66],"Cell":[68],"Illustrator.":[69],"topology":[72],"characterized":[74],"by":[75,155,188],"two":[76],"main":[77],"features:":[78],"(1)":[79],"presence":[81],"multiple":[83],"autoregulatory":[84,136],"feedback":[85,137,183],"loops":[86,138,184],"requiring":[87],"formation":[89,133],"protein":[91,131,165],"complexes,":[92],"(2)":[94],"role":[96],"spatial":[98,197],"regulators":[99],"determining":[100],"patterning.":[102],"resulting":[104,176],"shows":[106],"biologically":[107],"coherent":[108],"expression":[109,124,149],"patterns":[110],"involved":[113],"genes,":[114],"mutants":[117],"produce":[118],"experimentally":[119],"validated":[120],"changes":[121],"patterns.":[125,150],"requirement":[127],"heteromeric":[129],"higher-order":[130],"complex":[132],"positive":[135],"attenuates":[139],"stochastic":[140],"fluctuations":[141],"expression,":[144],"enabling":[145],"robust":[146],"organ-specific":[147],"If":[151],"autoregulation":[152],"mediated":[154],"monomers":[156],"or":[157],"homodimers":[158],"proteins,":[160,174],"small":[161],"variations":[162],"initial":[164],"levels":[166],"can":[167],"lead":[168],"to":[169],"biased":[170],"production":[171],"homeotic":[173,190],"ultimately":[175],"homeosis.":[178],"also":[180],"suggest":[181],"involving":[185],"miRNA":[186],"loci":[187],"which":[189],"control":[192],"activity":[194],"their":[196],"regulators.":[198]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":4},{"year":2012,"cited_by_count":3}],"updated_date":"2026-05-03T06:03:33.228499","created_date":"2025-10-10T00:00:00"}
