Fiber Clustering Acceleration With a Modified Kmeans++ Algorithm Using Data Parallelism.

Andrea Vázquez

Isaac Goicovich Paulo Olivares Claudio Román Andrea Vázquez Cyril Poupon Jean-François Mangin Pamela Guevara Cecilia Hernández Fiber Clustering Acceleration With a Modified Kmeans++ Algorithm Using Data Parallelism. 727859 2021 15 Frontiers Neuroinformatics https://doi.org/10.3389/fninf.2021.727859 db/journals/fini/fini15.html#GoicovichORVPMG21

Kurt G. Schilling François Rheault Laurent Petit Colin B. Hansen Vishwesh Nath Fang-Cheng Yeh Gabriel Girard Muhamed Barakovic Jonathan Rafael-Patino Thomas Yu Elda Fischi Gomez Marco Pizzolato Mario Ocampo-Pineda Simona Schiavi Erick Jorge Canales-Rodríguez Alessandro Daducci Cristina Granziera Giorgio M. Innocenti Jean-Philippe Thiran Laura Mancini Stephen J. Wastling Sirio Cocozza Maria Petracca Giuseppe Pontillo Matteo Mancini Sjoerd B. Vos Vejay N. Vakharia John S. Duncan Helena Melero Lidia Manzanedo Emilio Sanz-Morales Ángel Peña-Melián Fernando Calamante Arnaud Attye Ryan P. Cabeen Laura Korobova Arthur W. Toga Anupa Ambili Vijayakumari Drew Parker Ragini Verma Ahmed M. Radwan Stefan Sunaert Louise Emsell Alberto De Luca Alexander Leemans Claude J. Bajada Hamied A. Haroon Hojjatollah Azadbakht Maxime Chamberland Sila Genc Chantal M. W. Tax Ping Hong Yeh Rujirutana Srikanchana Colin D. Mcknight Joseph Yuan-Mou Yang Jian Chen 0031 Claire E. Kelly Chun-Hung Yeh Jérôme Cochereau Jerome J. Maller Thomas Welton Fabien Almairac Kiran K. Seunarine Chris A. Clark Fan Zhang 0013 Nikos Makris Alexandra J. Golby Yogesh Rathi Lauren J. O'Donnell Yihao Xia Dogu Baran Aydogan Yonggang Shi Francisco Guerreiro Fernandes Mathijs Raemaekers Shaun Warrington Stijn Michielse Alonso Ramirez-Manzanares Luis Concha Ramón Aranda Mariano Rivera Meraz Garikoitz Lerma-Usabiaga Lucas Roitman Lucius S. Fekonja Navona Calarco Michael Joseph Hajer Nakua Aristotle N. Voineskos Philippe Karan Gabrielle Grenier Jon Haitz Legarreta Nagesh Adluru Veena A. Nair Vivek Prabhakaran Andrew L. Alexander Koji Kamagata Yuya Saito Wataru Uchida Christina Andica Masahiro Abe Roza G. Bayrak Claudia A. M. Gandini Wheeler-Kingshott Egidio D'Angelo Fulvia Palesi Giovanni Savini Nicolò Rolandi Pamela Guevara Josselin Houenou Narciso López-López Jean-François Mangin Cyril Poupon Claudio Román Andrea Vázquez Chiara Maffei Mavilde Arantes José Paulo Andrade Susana Maria Silva Vince D. Calhoun Eduardo Caverzasi Simone Sacco Michael Lauricella Franco Pestilli Daniel Bullock Yang Zhan Edith Brignoni-Pérez Catherine Lebel Jess E. Reynolds Igor Nestrasil René Labounek Christophe Lenglet Amy Paulson Stefania Aulicka Sarah R. Heilbronner Katja Heuer Bramsh Qamar Chandio Javier Guaje Wei Tang Eleftherios Garyfallidis Rajikha Raja Adam W. Anderson Bennett A. Landman Maxime Descoteaux Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset? 118502 2021 243 NeuroImage https://doi.org/10.1016/j.neuroimage.2021.118502 https://www.wikidata.org/entity/Q118391353 db/journals/neuroimage/neuroimage243.html#SchillingRPHNYG21

Christopher Vergara Felipe Silva Isaías I. Huerta Narciso López-López Andrea Vázquez Josselin Houenou Cyril Poupon Jean-François Mangin Cecilia Hernández Pamela Guevara Group-Wise Cortical Surface Parcellation Based on Inter-Subject Fiber Clustering<sup>*</sup>. 2655-2659 2021 EMBC https://doi.org/10.1109/EMBC46164.2021.9631099 conf/embc/2021 db/conf/embc/embc2021.html#VergaraSHLVHPMH21 Cristobal Mendoza Claudio Román Andrea Vázquez Cyril Poupon Jean-François Mangin Cecilia Hernández Pamela Guevara Enhanced Automatic Segmentation for Superficial White Matter Fiber Bundles for Probabilistic Tractography Datasets. 3654-3658 2021 EMBC https://doi.org/10.1109/EMBC46164.2021.9630529 conf/embc/2021 db/conf/embc/embc2021.html#MendozaRVPMHG21

Narciso López-López Andrea Vázquez Cyril Poupon Jean-François Mangin Susana Ladra Pamela Guevara GeoSP: A parallel method for a cortical surface parcellation based on geodesic distance. 2021 abs/2103.14579 CoRR https://arxiv.org/abs/2103.14579 db/journals/corr/corr2103.html#abs-2103-14579

Narciso López-López Andrea Vázquez Josselin Houenou Cyril Poupon Jean-François Mangin Susana Ladra Pamela Guevara From Coarse to Fine-Grained Parcellation of the Cortical Surface Using a Fiber-Bundle Atlas. 32 2020 14 Frontiers Neuroinformatics https://doi.org/10.3389/fninf.2020.00032 https://www.wikidata.org/entity/Q100726211 db/journals/fini/fini14.html#Lopez-LopezVHPM20

Andrea Vázquez Narciso López-López Alexis Sánchez Josselin Houenou Cyril Poupon Jean-François Mangin Cecilia Hernández Pamela Guevara FFClust: Fast fiber clustering for large tractography datasets for a detailed study of brain connectivity. 117070 2020 220 NeuroImage https://doi.org/10.1016/j.neuroimage.2020.117070 https://www.wikidata.org/entity/Q96773007 db/journals/neuroimage/neuroimage220.html#VazquezLSHPMHG20

Isaías I. Huerta Andrea Vázquez Narciso López-López Josselin Houenou Cyril Poupon Jean-François Mangin Pamela Guevara Cecilia Hernández Inter-Subject Clustering of Brain Fibers from Whole-Brain Tractography. 1687-1691 2020 EMBC https://doi.org/10.1109/EMBC44109.2020.9175342 https://www.wikidata.org/entity/Q100447587 conf/embc/2020 db/conf/embc/embc2020.html#HuertaVLHPMGH20 Narciso López-López Andrea Vázquez Cyril Poupon Jean-François Mangin Susana Ladra Pamela Guevara GeoSP: A parallel method for a cortical surface parcellation based on geodesic distance. 1696-1700 2020 EMBC https://doi.org/10.1109/EMBC44109.2020.9175779 https://www.wikidata.org/entity/Q100447590 conf/embc/2020 db/conf/embc/embc2020.html#Lopez-LopezVPML20

Narciso López-López Andrea Vázquez Cyril Poupon Jean-François Mangin Pamela Guevara Cortical surface parcellation based on intra-subject white matter fiber clustering. 2020 abs/2002.09034 CoRR https://arxiv.org/abs/2002.09034 db/journals/corr/corr2002.html#abs-2002-09034

Andrea Vázquez Narciso López-López Nicole Labra Miguel E. Figueroa Cyril Poupon Jean-François Mangin Cecilia Hernández Pamela Guevara Parallel Optimization of Fiber Bundle Segmentation for Massive Tractography Datasets. 178-181 2019 ISBI https://doi.org/10.1109/ISBI.2019.8759208 conf/isbi/2019 db/conf/isbi/isbi2019.html#VazquezLLFPMHG19

Andrea Vázquez Narciso López-López Nicole Labra Miguel E. Figueroa Cyril Poupon Jean-François Mangin Cecilia Hernández Pamela Guevara Parallel optimization of fiber bundle segmentation for massive tractography datasets. 2019 abs/1912.11494 CoRR http://arxiv.org/abs/1912.11494 db/journals/corr/corr1912.html#abs-1912-11494

Masahiro Abe Nagesh Adluru Andrew L. Alexander Fabien Almairac Adam W. Anderson Christina Andica José Paulo Andrade Ramón Aranda Mavilde Arantes Arnaud Attye Stefania Aulicka Nicole Labra AvilaNicole Labra Dogu Baran Aydogan Hojjatollah Azadbakht Claude J. Bajada Muhamed Barakovic Roza G. Bayrak Edith Brignoni-Pérez Daniel Bullock Ryan P. Cabeen Fernando Calamante Navona Calarco Vince D. Calhoun Erick Jorge Canales-Rodríguez Eduardo Caverzasi Maxime Chamberland Bramsh Qamar Chandio Jian Chen 0031 Christopher A. ClarkChris A. Clark Jérôme Cochereau Sirio Cocozza Luis Concha Alessandro Daducci Egidio D'Angelo Maxime Descoteaux John S. Duncan Louise Emsell Lucius S. Fekonja Francisco Guerreiro Fernandes Miguel E. Figueroa Eleftherios Garyfallidis Sila Genc Gabriel Girard Isaac Goicovich Alexandra J. Golby Elda Fischi Gomez Cristina Granziera Gabrielle Grenier Javier Guaje Pamela Guevara Colin B. Hansen Hamied A. Haroon Sarah R. Heilbronner Cecilia Hernández Katja Heuer Josselin Houenou Isaías I. Huerta Giorgio M. Innocenti Michael Joseph Koji Kamagata Philippe Karan Claire E. Kelly Laura Korobova René Labounek Susana Ladra Bennett A. Landman Michael Lauricella Catherine Lebel Alexander Leemans Jon Haitz Legarreta Christophe Lenglet Garikoitz Lerma-Usabiaga Narciso López-López Alberto De Luca Chiara Maffei Nikos Makris Jerome J. Maller Laura Mancini Matteo Mancini Jean-François Mangin Lidia Manzanedo Colin D. Mcknight Helena Melero Cristobal Mendoza Mariano Rivera Meraz Stijn Michielse Veena A. Nair Hajer Nakua Vishwesh Nath Igor Nestrasil Mario Ocampo-Pineda Lauren O'DonnellLauren J. O'Donnell Paulo Olivares Fulvia Palesi Drew Parker Amy Paulson Ángel Peña-Melián Franco Pestilli Laurent Petit Maria Petracca Marco Pizzolato Giuseppe Pontillo Cyril Poupon Vivek Prabhakaran Ahmed M. Radwan Mathijs Raemaekers Jonathan Rafael-Patino Rajikha Raja Alonso Ramirez-Manzanares Yogesh Rathi Jess E. Reynolds François Rheault Lucas Roitman Nicolò Rolandi Claudio Román Simone Sacco Yuya Saito Alexis Sánchez Emilio Sanz-Morales Giovanni Savini Simona Schiavi Kurt SchillingKurt G. Schilling Kiran K. Seunarine Yonggang Shi Felipe Silva Susana Maria Silva Rujirutana Srikanchana Stefan Sunaert Wei Tang Chantal M. W. Tax Jean-Philippe Thiran Arthur W. Toga Wataru Uchida Vejay VakhariaVejay N. Vakharia Christopher Vergara Ragini Verma Anupa Ambili Vijayakumari Aristotle N. Voineskos Sjoerd B. Vos Shaun Warrington Stephen J. Wastling Thomas Welton Claudia A. M. Gandini Wheeler-Kingshott Yihao Xia Joseph Yuan-Mou Yang Chun-Hung Yeh Fang-Cheng Yeh Ping Hong Yeh Thomas Yu Yang Zhan Fan Zhang 0013