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. 2005 Apr 1;21(7):988-92.
doi: 10.1093/bioinformatics/bti082. Epub 2004 Oct 27.

PDBML: the representation of archival macromolecular structure data in XML

John Westbrook  1 , Nobutoshi Ito, Haruki Nakamura, Kim Henrick, Helen M Berman
Affiliations
Free article

PDBML: the representation of archival macromolecular structure data in XML

John Westbrook et al. Bioinformatics. .
Free article

Abstract

The Protein Data Bank (PDB) has recently released versions of the PDB Exchange dictionary and the PDB archival data files in XML format collectively named PDBML. The automated generation of these XML files is driven by the data dictionary infrastructure in use at the PDB. The correspondences between the PDB dictionary and the XML schema metadata are described as well as the XML representations of PDB dictionaries and data files.

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