PUMA2--grid-based high-throughput analysis of genomes and metabolic pathways (Q24538614)

6 July 2017

title

PUMA2--grid-based high-throughput analysis of genomes and metabolic pathways (English)

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6 July 2017

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Natalia Maltsev

1

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6 July 2017

Elizabeth Glass

2

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6 July 2017

Dinanath Sulakhe

3

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6 July 2017

Alexis Rodriguez

4

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6 July 2017

Mustafa H Syed

5

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6 July 2017

Tanuja Bompada

6

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6 July 2017

Yi Zhang

7

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6 July 2017

Mark D'Souza

8

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6 July 2017

publication date

1 January 2006

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6 July 2017

language of work or name

English

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published in

Nucleic Acids Research

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6 July 2017

volume

34

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6 July 2017

issue

Database issue

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6 July 2017

page(s)

D369-72

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The integrated microbial genomes (IMG) system

6 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

Database resources of the National Center for Biotechnology Information

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

EcoCyc: a comprehensive database resource for Escherichia coli

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

The CATH Domain Structure Database and related resources Gene3D and DHS provide comprehensive domain family information for genome analysis

24 March 2017

1 reference

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The Universal Protein Resource (UniProt)

24 March 2017

1 reference

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The Pfam protein families database

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

The ENZYME database in 2000

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

24 March 2017

The Protein Data Bank

1 reference

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

24 March 2017

1 reference

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The KEGG resource for deciphering the genome

24 March 2017

1 reference

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The Gene Ontology (GO) database and informatics resource

24 March 2017

1 reference

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EMBOSS: the European Molecular Biology Open Software Suite

24 March 2017

1 reference

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SCOP database in 2004: refinements integrate structure and sequence family data

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

GNARE: automated system for high-throughput genome analysis with grid computational backend

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

PAX of mind for pathway researchers

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

27 September 2017

Service-oriented science

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

MetaCyc: a multiorganism database of metabolic pathways and enzymes.

27 September 2017

1 reference

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The Protein Information Resource

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

Evaluation of methods for the prediction of membrane spanning regions

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

WIT: integrated system for high-throughput genome sequence analysis and metabolic reconstruction

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

A reconstruction of the metabolism of Methanococcus jannaschii from sequence data.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

The metabolic pathway collection from EMP: the enzymes and metabolic pathways database

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

The Comprehensive Microbial Resource

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

Blocks+: a non-redundant database of protein alignment blocks derived from multiple compilations

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1347457

29 November 2018

Identifiers

DOI

10.1093/NAR/GKJ095

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journals/nar/MaltsevGSRSBZD06

6 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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6 July 2017

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