Predicting residue–residue contacts using random forest models (Q30408474)

21 June 2017

title

Predicting residue-residue contacts using random forest models (English)

1 reference

21 June 2017

Predicting residue–residue contacts using random forest models (English)

1 reference

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTR579

15 December 2024

main subject

random forest

0 references

artificial intelligence

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22016406

15 December 2024

2

Yaping Fang

1 reference

21 June 2017

1

Yunqi Li

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22016406

15 December 2024

author name string

Jianwen Fang

3

1 reference

21 June 2017

publication date

20 October 2011

1 reference

https://academic.oup.com/bioinformatics/article-pdf/27/24/3379/48861490/bioinformatics_27_24_3379.pdf

21 June 2017

language of work or name

English

0 references

work available at URL

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A22016406

15 December 2024

1 reference

21 June 2017

volume

27

1 reference

21 June 2017

issue

24

1 reference

21 June 2017

page(s)

3379-3384

1 reference

Basic local alignment search tool

21 June 2017

cites work

1 reference

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Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue-residue contacts

21 January 2018

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Identifying Important Risk Factors for Survival in Kidney Graft Failure Patients Using Random Survival Forests

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Can molecular dynamics simulations provide high-resolution refinement of protein structure?

21 January 2018

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Prediction of protein long-range contacts using an ensemble of genetic algorithm classifiers with sequence profile centers

21 January 2018

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Improvement in protein functional site prediction by distinguishing structural and functional constraints on protein family evolution using computational design

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Improved residue contact prediction using support vector machines and a large feature set.

21 January 2018

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21 January 2018

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Assessment of domain boundary predictions and the prediction of intramolecular contacts in CASP8.

21 January 2018

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Feature selection in validating mass spectrometry database search results.

21 January 2018

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A neural network based predictor of residue contacts in proteins

21 January 2018

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Progress in predicting inter-residue contacts of proteins with neural networks and correlated mutations.

21 January 2018

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EVAcon: a protein contact prediction evaluation service

21 January 2018

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A lattice model for protein structure prediction at low resolution

21 January 2018

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REMO: A new protocol to refine full atomic protein models from C-alpha traces by optimizing hydrogen-bonding networks

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21 January 2018

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Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading

21 January 2018

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21 January 2018

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Improved prediction of the number of residue contacts in proteins by recurrent neural networks

21 January 2018

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PROFcon: novel prediction of long-range contacts

21 January 2018

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SELECTpro: effective protein model selection using a structure-based energy function resistant to BLUNDERs

21 January 2018

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Prediction of protein-protein interaction sites in sequences and 3D structures by random forests

21 January 2018

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NNcon: improved protein contact map prediction using 2D-recursive neural networks

21 January 2018

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A two-stage approach for improved prediction of residue contact maps.

21 January 2018

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Prediction of DNA-binding residues from protein sequence information using random forests

21 January 2018

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A comprehensive assessment of sequence-based and template-based methods for protein contact prediction

21 January 2018

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Improving protein structure prediction using multiple sequence-based contact predictions

21 January 2018

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Predicting residue-residue contact maps by a two-layer, integrated neural-network method

21 January 2018

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Prediction of inter-residue contacts map based on genetic algorithm optimized radial basis function neural network and binary input encoding scheme

21 January 2018

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I-TASSER: fully automated protein structure prediction in CASP8

21 January 2018

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TOUCHSTONE II: a new approach to ab initio protein structure prediction

21 January 2018

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Sequence specificity, statistical potentials, and three-dimensional structure prediction with self-correcting distance geometry calculations of beta-sheet formation in proteins

21 January 2018

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Striped sheets and protein contact prediction

21 January 2018

1 reference

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21 January 2018

Random Forests

3

1 reference

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Evaluation of residue-residue contact predictions in CASP9

15 December 2024

21

1 reference

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Predicting interresidue contacts using templates and pathways

15 December 2024

26

1 reference

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTR579

15 December 2024

Identifiers

1 reference

journals/bioinformatics/LiFF11

21 June 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference