{"id":"https://openalex.org/W4318148047","doi":"https://doi.org/10.1109/bigdata55660.2022.10020992","title":"BrainGB: A Benchmark for Brain Network Analysis with Graph Neural Networks (Extended Abstract)","display_name":"BrainGB: A Benchmark for Brain Network Analysis with Graph Neural Networks (Extended Abstract)","publication_year":2022,"publication_date":"2022-12-17","ids":{"openalex":"https://openalex.org/W4318148047","doi":"https://doi.org/10.1109/bigdata55660.2022.10020992"},"language":"en","primary_location":{"id":"doi:10.1109/bigdata55660.2022.10020992","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata55660.2022.10020992","pdf_url":null,"source":{"id":"https://openalex.org/S4363607709","display_name":"2022 IEEE International Conference on Big Data (Big Data)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Big Data (Big Data)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5033157677","display_name":"Hejie Cui","orcid":"https://orcid.org/0000-0001-6388-2619"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hejie Cui","raw_affiliation_strings":["Emory University,Department of Computer Science,GA,USA","Department of Computer Science, Emory University, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emory University,Department of Computer Science,GA,USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Computer Science, Emory University, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100752235","display_name":"Wei Dai","orcid":"https://orcid.org/0000-0002-3093-6454"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wei Dai","raw_affiliation_strings":["Emory University,Department of Computer Science,GA,USA","Department of Computer Science, Emory University, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emory University,Department of Computer Science,GA,USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Computer Science, Emory University, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015101640","display_name":"Yanqiao Zhu","orcid":"https://orcid.org/0000-0003-2205-5304"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yanqiao Zhu","raw_affiliation_strings":["University of California,Department of Computer Science,Los Angeles,CA,USA","Department of Computer Science, University of California, Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of California,Department of Computer Science,Los Angeles,CA,USA","institution_ids":["https://openalex.org/I161318765"]},{"raw_affiliation_string":"Department of Computer Science, University of California, Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020981458","display_name":"Xuan Kan","orcid":"https://orcid.org/0000-0003-0039-8314"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xuan Kan","raw_affiliation_strings":["Emory University,Department of Computer Science,GA,USA","Department of Computer Science, Emory University, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emory University,Department of Computer Science,GA,USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Computer Science, Emory University, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046858414","display_name":"Antonio Aodong Chen Gu","orcid":"https://orcid.org/0000-0002-9525-9263"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Antonio Aodong Chen Gu","raw_affiliation_strings":["Emory University,Department of Computer Science,GA,USA","Department of Computer Science, Emory University, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emory University,Department of Computer Science,GA,USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Computer Science, Emory University, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056951551","display_name":"Joshua Lukemire","orcid":null},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joshua Lukemire","raw_affiliation_strings":["Emory University,Department of Biostatistics and Bioinformatics,GA,USA","Department of Biostatistics and Bioinformatics, Emory University, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emory University,Department of Biostatistics and Bioinformatics,GA,USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Biostatistics and Bioinformatics, Emory University, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001309013","display_name":"Liang Zhan","orcid":"https://orcid.org/0000-0002-7920-4828"},"institutions":[{"id":"https://openalex.org/I170201317","display_name":"University of Pittsburgh","ror":"https://ror.org/01an3r305","country_code":"US","type":"education","lineage":["https://openalex.org/I170201317"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liang Zhan","raw_affiliation_strings":["University of Pittsburgh,Department of Electrical and Computer Engineering,PA,USA","Department of Electrical and Computer Engineering, University of Pittsburgh, PA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Pittsburgh,Department of Electrical and Computer Engineering,PA,USA","institution_ids":["https://openalex.org/I170201317"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, University of Pittsburgh, PA, USA","institution_ids":["https://openalex.org/I170201317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071709543","display_name":"Lifang He","orcid":"https://orcid.org/0000-0001-7810-9071"},"institutions":[{"id":"https://openalex.org/I186143895","display_name":"Lehigh University","ror":"https://ror.org/012afjb06","country_code":"US","type":"education","lineage":["https://openalex.org/I186143895"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lifang He","raw_affiliation_strings":["Lehigh University,Department of Computer Science and Engineering,PA,USA","Department of Computer Science and Engineering, Lehigh University, PA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lehigh University,Department of Computer Science and Engineering,PA,USA","institution_ids":["https://openalex.org/I186143895"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Lehigh University, PA, USA","institution_ids":["https://openalex.org/I186143895"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018964484","display_name":"Ying Guo","orcid":"https://orcid.org/0000-0003-3934-3097"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ying Guo","raw_affiliation_strings":["Emory University,Department of Biostatistics and Bioinformatics,GA,USA","Department of Biostatistics and Bioinformatics, Emory University, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emory University,Department of Biostatistics and Bioinformatics,GA,USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Biostatistics and Bioinformatics, Emory University, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006897094","display_name":"Carl Yang","orcid":"https://orcid.org/0000-0001-9145-4531"},"institutions":[{"id":"https://openalex.org/I150468666","display_name":"Emory University","ror":"https://ror.org/03czfpz43","country_code":"US","type":"education","lineage":["https://openalex.org/I150468666"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carl Yang","raw_affiliation_strings":["Emory University,Department of Computer Science,GA,USA","Department of Computer Science, Emory University, GA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Emory University,Department of Computer Science,GA,USA","institution_ids":["https://openalex.org/I150468666"]},{"raw_affiliation_string":"Department of Computer Science, Emory University, GA, USA","institution_ids":["https://openalex.org/I150468666"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.7946,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.87667248,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"4968","last_page":"4969"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10429","display_name":"EEG and Brain-Computer Interfaces","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14393","display_name":"Health, Environment, Cognitive Aging","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/2307","display_name":"Health, Toxicology and Mutagenesis"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8191685080528259},{"id":"https://openalex.org/keywords/connectome","display_name":"Connectome","score":0.6809353828430176},{"id":"https://openalex.org/keywords/neuroimaging","display_name":"Neuroimaging","score":0.5684188604354858},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5476511716842651},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.519515872001648},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.516727864742279},{"id":"https://openalex.org/keywords/modalities","display_name":"Modalities","score":0.5105732679367065},{"id":"https://openalex.org/keywords/bridging","display_name":"Bridging (networking)","score":0.4868856966495514},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4846261441707611},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.4487152397632599},{"id":"https://openalex.org/keywords/connectomics","display_name":"Connectomics","score":0.42225196957588196},{"id":"https://openalex.org/keywords/power-graph-analysis","display_name":"Power graph analysis","score":0.41826269030570984},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.37909865379333496},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3442115783691406},{"id":"https://openalex.org/keywords/functional-connectivity","display_name":"Functional connectivity","score":0.25654613971710205},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.23727205395698547},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.12864482402801514},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.12451696395874023}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8191685080528259},{"id":"https://openalex.org/C45715564","wikidata":"https://www.wikidata.org/wiki/Q1292103","display_name":"Connectome","level":3,"score":0.6809353828430176},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.5684188604354858},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5476511716842651},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.519515872001648},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.516727864742279},{"id":"https://openalex.org/C2779903281","wikidata":"https://www.wikidata.org/wiki/Q6888026","display_name":"Modalities","level":2,"score":0.5105732679367065},{"id":"https://openalex.org/C174348530","wikidata":"https://www.wikidata.org/wiki/Q188635","display_name":"Bridging (networking)","level":2,"score":0.4868856966495514},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4846261441707611},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.4487152397632599},{"id":"https://openalex.org/C2779097318","wikidata":"https://www.wikidata.org/wiki/Q2993446","display_name":"Connectomics","level":4,"score":0.42225196957588196},{"id":"https://openalex.org/C106937863","wikidata":"https://www.wikidata.org/wiki/Q7236518","display_name":"Power graph analysis","level":3,"score":0.41826269030570984},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.37909865379333496},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3442115783691406},{"id":"https://openalex.org/C3018011982","wikidata":"https://www.wikidata.org/wiki/Q7316120","display_name":"Functional connectivity","level":2,"score":0.25654613971710205},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.23727205395698547},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.12864482402801514},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.12451696395874023},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C36289849","wikidata":"https://www.wikidata.org/wiki/Q34749","display_name":"Social science","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/bigdata55660.2022.10020992","is_oa":false,"landing_page_url":"https://doi.org/10.1109/bigdata55660.2022.10020992","pdf_url":null,"source":{"id":"https://openalex.org/S4363607709","display_name":"2022 IEEE International Conference on Big Data (Big Data)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 IEEE International Conference on Big Data (Big Data)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W1999653836","https://openalex.org/W2153528736","https://openalex.org/W2526511911","https://openalex.org/W2949763225","https://openalex.org/W2950317798","https://openalex.org/W2970282997","https://openalex.org/W3199008037","https://openalex.org/W6726873649","https://openalex.org/W6754929296"],"related_works":["https://openalex.org/W3210800206","https://openalex.org/W1744057168","https://openalex.org/W2091472861","https://openalex.org/W2945607120","https://openalex.org/W2124698428","https://openalex.org/W2086448982","https://openalex.org/W112425480","https://openalex.org/W2550381304","https://openalex.org/W2946138627","https://openalex.org/W3112117434"],"abstract_inverted_index":{"Mapping":[0],"the":[1,4,16,89,108,150],"connectome":[2],"of":[3,15,62,110,127],"human":[5],"brain":[6,69,82,94,135,145],"using":[7],"structural":[8,102],"or":[9],"functional":[10,100],"connectivity":[11],"has":[12,55],"become":[13],"one":[14],"most":[17],"pervasive":[18],"paradigms":[19],"for":[20,42,68,81,98,130,178],"neuroimaging":[21,103],"analysis.":[22,71],"Recently,":[23],"Graph":[24],"Neural":[25],"Networks":[26],"(GNNs)":[27],"motivated":[28],"from":[29],"geometric":[30],"deep":[31],"learning":[32],"have":[33],"attracted":[34],"broad":[35],"interest":[36],"due":[37],"to":[38,64],"their":[39,48],"established":[40],"power":[41],"modeling":[43],"complex":[44],"networked":[45],"data.":[46],"Despite":[47],"superior":[49],"performance":[50],"in":[51,181],"many":[52],"fields,":[53],"there":[54],"not":[56],"yet":[57],"been":[58],"a":[59,79,125],"systematic":[60],"study":[61],"how":[63],"design":[65],"effective":[66,131],"GNNs":[67],"network":[70,83,95,146],"To":[72,137],"bridge":[73],"this":[74,168,182],"gap,":[75],"we":[76,148],"present":[77],"BrainGB,":[78],"benchmark":[80],"analysis":[84],"with":[85,154],"GNNs.":[86],"BrainGB":[87],"standardizes":[88],"process":[90],"by":[91],"(1)":[92],"summarizing":[93],"construction":[96],"pipelines":[97],"both":[99],"and":[101,105,121,123,140,175,184],"modalities":[104,122],"(2)":[106],"modularizing":[107],"implementation":[109],"GNN":[111,132],"designs.":[112],"We":[113,165],"conduct":[114],"extensive":[115],"experiments":[116],"on":[117,134,143],"datasets":[118],"across":[119],"cohorts":[120],"recommend":[124],"set":[126],"general":[128],"recipes":[129],"designs":[133],"networks.":[136],"support":[138],"open":[139],"reproducible":[141],"research":[142,180],"GNN-based":[144],"analysis,":[147],"host":[149],"BrainGBwebsite":[151],"at":[152],"https://braingb.us":[153],"models,":[155],"tutorials,":[156],"examples,":[157],"as":[158,160],"well":[159],"an":[161],"out-of-box":[162],"Python":[163],"package.":[164],"hope":[166],"that":[167],"work":[169],"will":[170],"provide":[171],"useful":[172],"empirical":[173],"evidence":[174],"offer":[176],"insights":[177],"future":[179],"novel":[183],"promising":[185],"direction.":[186]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
