Investigating self-supervised image denoising with denaturation.

Atsushi Tokuhisa

Hiroki Waida Kimihiro Yamazaki Atsushi Tokuhisa Mutsuyo Wada Yuichiro Wada Investigating self-supervised image denoising with denaturation. 106966 2025 184 Neural Networks https://doi.org/10.1016/j.neunet.2024.106966 db/journals/nn/nn184.html#WaidaYTWW25 streams/journals/nn

Hiroki Waida Kimihiro Yamazaki Atsushi Tokuhisa Mutsuyo Wada Yuichiro Wada Investigating Self-Supervised Image Denoising with Denaturation. 2024 abs/2405.01124 CoRR https://doi.org/10.48550/arXiv.2405.01124 db/journals/corr/corr2405.html#abs-2405-01124

Yosuke Oyama Akihiro Tabuchi Atsushi Tokuhisa Accelerating AlphaFold2 Inference of Protein Three-Dimensional Structure on the Supercomputer Fugaku. 1-9 2023 FlexScience@HPDC https://doi.org/10.1145/3589013.3596674 https://www.wikidata.org/entity/Q130993909 conf/flexscience/2023 db/conf/flexscience/flexscience2023.html#OyamaTT23 Kimihiro Yamazaki Yuichiro Wada Atsushi Tokuhisa Mutsuyo Wada Takashi Katoh Yuhei Umeda Yasushi Okuno Akira Nakagawa An Auto-Encoder to Reconstruct Structure with Cryo-EM Images via Theoretically Guaranteed Isometric Latent Space, and Its Application for Automatically Computing the Conformational Pathway. 394-404 2023 MICCAI (1) https://doi.org/10.1007/978-3-031-43907-0_38 conf/miccai/2023-1 db/conf/miccai/miccai2023-1.html#YamazakiWTWKUON23

Kenichiro Takaba Chiduru Watanabe Atsushi Tokuhisa Yoshinobu Akinaga Biao Ma Ryo Kanada Mitsugu Araki Yasushi Okuno Yusuke Kawashima Hirotomo Moriwaki Norihito Kawashita Teruki Honma Kaori Fukuzawa Shigenori Tanaka Protein-ligand binding affinity prediction of cyclin-dependent kinase-2 inhibitors by dynamically averaged fragment molecular orbital-based interaction energy. 1362-1371 2022 43 J. Comput. Chem. 20 https://doi.org/10.1002/jcc.26940 https://www.wikidata.org/entity/Q113328845 db/journals/jcc/jcc43.html#TakabaWTAMKAOKM22

Atsushi Tokuhisa Yoshinobu Akinaga Kei Terayama Yuji Okamoto Yasushi Okuno Single-Image Super-Resolution Improvement of X-ray Single-Particle Diffraction Images Using a Convolutional Neural Network. 3352-3364 2022 62 J. Chem. Inf. Model. 14 https://doi.org/10.1021/acs.jcim.2c00660 db/journals/jcisd/jcisd62.html#TokuhisaATOO22

Atsushi Tokuhisa Ryo Kanada Shuntaro Chiba Kei Terayama Yuta Isaka Biao Ma Narutoshi Kamiya Yasushi Okuno Coarse-Grained Diffraction Template Matching Model to Retrieve Multiconformational Models for Biomolecule Structures from Noisy Diffraction Patterns. 2803-2818 2020 60 J. Chem. Inf. Model. 6 https://doi.org/10.1021/acs.jcim.0c00131 https://www.wikidata.org/entity/Q95942033 db/journals/jcisd/jcisd60.html#TokuhisaKCTIMKO20

Koichiro Kato Tomohide Masuda Chiduru Watanabe Naoki Miyagawa Hideo Mizouchi Shumpei Nagase Kikuko Kamisaka Kanji Oshima Satoshi Ono Hiroshi Ueda Atsushi Tokuhisa Ryo Kanada Masateru Ohta Mitsunori Ikeguchi Yasushi Okuno Kaori Fukuzawa Teruki Honma High-Precision Atomic Charge Prediction for Protein Systems Using Fragment Molecular Orbital Calculation and Machine Learning. 3361-3368 2020 60 J. Chem. Inf. Model. 7 https://doi.org/10.1021/acs.jcim.0c00273 https://www.wikidata.org/entity/Q96119497 db/journals/jcisd/jcisd60.html#KatoMWMMNKOOUTK20

Atsushi Hori Kazumi Yoshinaga Atsushi Tokuhisa Yasumasa Joti Kensuke Okada Takashi Sugimoto Mitsuhiro Yamaga Takaki Hatsui Makina Yabashi Yuji Sugita Yutaka Ishikawa Nobuhiro Go Decoupling Architecture for All-to-all Computation. 169 2014 EuroMPI/ASIA https://doi.org/10.1145/2642769.2642801 https://www.wikidata.org/entity/Q62846576 conf/pvm/2014 db/conf/pvm/eurompi2014.html#HoriYTJOSYHYSIG14 Yoshinobu Akinaga Mitsugu Araki Shuntaro Chiba Kaori Fukuzawa Nobuhiro Go Takaki Hatsui Teruki Honma Atsushi Hori Mitsunori Ikeguchi Yuta Isaka Yutaka Ishikawa Yasumasa Joti Kikuko Kamisaka Narutoshi Kamiya Ryo Kanada Koichiro Kato Takashi Katoh Yusuke Kawashima Norihito Kawashita Biao Ma Tomohide Masuda Naoki Miyagawa Hideo Mizouchi Hirotomo Moriwaki Shumpei Nagase Akira Nakagawa Masateru Ohta Kensuke Okada Yuji Okamoto Yasushi Okuno Satoshi Ono Kanji Oshima Yosuke Oyama Takashi Sugimoto Yuji Sugita Akihiro Tabuchi Kenichiro Takaba Shigenori Tanaka Kei Terayama Hiroshi Ueda Yuhei Umeda Mutsuyo Wada Yuichiro Wada Hiroki Waida Chiduru Watanabe Makina Yabashi Mitsuhiro Yamaga Kimihiro Yamazaki Kazumi Yoshinaga