Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases.

Emily S. Grau

Margaret Staton Ethalinda Cannon Lacey-Anne Sanderson Jill L. Wegrzyn Tavis K. Anderson Sean Buehler Irene Cobo-Simón Kay Faaberg Emily S. Grau Valentin Guignon Jessica Gunoskey Blake Inderski Sook Jung Kelly Lager Dorrie Main Monica Poelchau Risharde Ramnath Peter Richter 0001 Joe West Stephen P. Ficklin Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases. 2021 22 Briefings Bioinform. 6 https://doi.org/10.1093/bib/bbab238 https://www.wikidata.org/entity/Q115000606 db/journals/bib/bib22.html#StatonCSWABCFGG21

Taylor Falk Nic Herndon Emily S. Grau Sean Buehler Peter Richter 0001 Sumaira Zaman Eliza M. Baker Risharde Ramnath Stephen P. Ficklin Margaret Staton Frank Alex Feltus Sook Jung Doreen Main Jill L. Wegrzyn Growing and cultivating the forest genomics database, TreeGenes. baz043 2019 2019 Database J. Biol. Databases Curation https://doi.org/10.1093/database/baz043 https://www.wikidata.org/entity/Q64097436 db/journals/biodb/biodb2019.html#FalkHGBRZBRFSFJ19

Taylor Falk Nic Herndon Emily S. Grau Sean Buehler Peter Richter 0001 Sumaira Zaman Eliza M. Baker Risharde Ramnath Stephen P. Ficklin Margaret Staton Frank Alex Feltus Sook Jung Doreen Main Jill L. Wegrzyn Growing and cultivating the forest genomics database, TreeGenes. bay084 2018 2018 Database J. Biol. Databases Curation https://doi.org/10.1093/database/bay084 https://www.wikidata.org/entity/Q58724873 db/journals/biodb/biodb2018.html#FalkHGBRZBRFSFJ18

Lisa C. Harper Jacqueline D. Campbell Ethalinda K. S. Cannon Sook Jung Monica Poelchau Ramona L. Walls Carson M. Andorf Elizabeth Arnaud Tanya Z. Berardini Clayton L. Birkett Steven B. Cannon James D. Carson Bradford Condon Laurel Cooper Nathan A. Dunn Christine G. Elsik Andrew D. Farmer Stephen P. Ficklin David M. Grant Emily S. Grau Nic Herndon Zhi-Liang Hu Jodi L. Humann Pankaj Jaiswal Clément Jonquet Marie-Angélique Laporte Pierre Larmande Gerard R. Lazo Fiona McCarthy Naama Menda Christopher J. Mungall Monica C. Munoz-Torres Sushma Naithani Rex T. Nelson Daureen Nesdill Carissa A. Park James M. Reecy Leonore Reiser Lacey-Anne Sanderson Taner Z. Sen Margaret Staton Sabarinath Subramaniam Marcela Karey Tello-Ruiz Victor Unda Deepak R. Unni Liya Wang Doreen Ware Jill L. Wegrzyn Jason Williams 0003 Margaret Woodhouse Jing Yu 0002 Doreen Main AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. bay088 2018 2018 Database J. Biol. Databases Curation https://doi.org/10.1093/database/bay088 https://www.wikidata.org/entity/Q56655129 db/journals/biodb/biodb2018.html#HarperCCJPWAABB18

Nic Herndon Taylor Falk Emily S. Grau Sook Jung Stephen P. Ficklin Dorrie Main Margaret E. Staton Jill L. Wegrzyn Association Mapping for Forest Trees with CartograTree. 137-149 2018 Application of Semantic Technology in Biodiversity Science https://doi.org/10.3233/978-1-61499-854-9-137 series/ssw/33 db/series/ssw/ssw33.html#HerndonFGJFMSW18

Nic Herndon Emily S. Grau Iman Batra Steven A. Demurjian Hans A. Vasquez-Gross Margaret E. Staton Jill L. Wegrzyn CartograTree: Enabling landscape genomics for forest trees. e2345 2016 4 PeerJ Prepr. https://doi.org/10.7287/peerj.preprints.2345v3 db/journals/peerjpre/peerjpre4.html#HerndonGBDVSW16

Tavis K. Anderson Carson M. Andorf Elizabeth Arnaud Eliza M. Baker Iman Batra Tanya Z. Berardini Clayton L. Birkett Sean Buehler Jacqueline D. Campbell Ethalinda Cannon Ethalinda K. S. Cannon Steven B. Cannon James D. Carson Irene Cobo-Simón Bradford Condon Laurel Cooper Steven A. Demurjian Nathan A. Dunn Christine G. Elsik Kay Faaberg Taylor Falk Andrew D. Farmer F. Alex FeltusFrank Alex Feltus Stephen P. Ficklin David M. Grant Valentin Guignon Jessica Gunoskey Lisa C. Harper Nic Herndon Zhi-Liang Hu Jodi L. Humann Blake Inderski Pankaj Jaiswal Clément Jonquet Sook Jung Kelly Lager Marie-Angélique Laporte Pierre Larmande Gerard R. Lazo Dorrie MainDoreen Main Fiona McCarthy Naama Menda Chris MungallChristopher J. Mungall Monica C. Munoz-Torres Sushma Naithani Rex T. Nelson Daureen Nesdill Carissa A. Park Monica Poelchau Risharde Ramnath James M. Reecy Leonore Reiser Peter Richter 0001 Lacey-Anne Sanderson Taner Z. Sen Margaret StatonMargaret E. Staton Sabarinath Subramaniam Marcela K. Tello-RuizMarcela Karey Tello-Ruiz Victor Unda Deepak R. Unni Hans A. Vasquez-Gross Ramona L. Walls Liya Wang Doreen Ware Jill L. Wegrzyn Joe West Jason Williams 0003 Margaret Woodhouse Jing Yu 0002 Sumaira Zaman